Thursday, November 15, 2018

[Bioinformatics] How to open and count total base Fasta file in Windows?







Question:

How to open and count total base from Fasta file in Windows?


Answer:

There are two answers to open and count total base from Fasta file in Windows.


Solution1)

Read Fasta file with Python Script.



https://github.com/KennethJHan/FastaReader/blob/master/Python/FastaReader.py





Solution2)

Download FastaReader GUI v1.0

1) Download FastaReaderGui.jar

https://github.com/KennethJHan/FastaReader/tree/master/JAVA_GUI/v1.0

2) Launch FastaReaderGui.jar.
Click "Open a Fasta File" button.


3) Select and open Fasta file.


4) See the result.



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